STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU26286.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
ALU28325.1
Transmembrane permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.682
ALU26285.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.612
ALU26356.1
Peptidase M64; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.536
ALU26948.1
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.530
ALU26194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.463
ALU26313.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.458
ALU26283.1
SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.444
ALU26284.1
Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
ALU27238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.407
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.