Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU26637.1Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1060 aa)    
Predicted Functional Partners:
ALU26633.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
ALU26634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
AS202_15185
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.838
ALU26635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.803
ALU26636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.797
ALU27751.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.751
ALU27948.1
Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.664
ALU27414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.633
ALU25007.1
Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.
  
  
 0.625
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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