Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU27106.1Phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
ALU24962.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
ALU27052.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.962
ALU25565.1
Uracil phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.923
ALU26329.1
Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.916
tdk
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.914
surE
Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.906
ALU24848.1
Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
ALU27848.1
PyrR protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
ALU27107.1
SUI1 family translation initiation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.812
ALU27108.1
Flavonol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.572
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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