STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU27373.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)    
Predicted Functional Partners:
ALU27374.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
ALU27372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
ALU27371.1
Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.592
ALU28186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.549
ALU24979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
ALU24976.1
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.500
ALU24738.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.462
ALU24743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.462
ALU25928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.462
ALU25931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.462
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.