Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU27506.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
dinB-2
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
     0.803
ALU27508.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.727
ALU24978.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
ALU25007.1
Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.
  
  
 0.543
ALU26338.1
Clp protease ClpS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpS family.
  
     0.516
ALU24748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
ALU27327.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
ALU24942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.
  
     0.431
ALU25144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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