Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALM93523.1 | ALM93931.1 | RO02_02495 | RO02_04640 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
| ALM93523.1 | ALM93932.1 | RO02_02495 | RO02_04645 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| ALM93523.1 | ALM94009.1 | RO02_02495 | RO02_05060 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.817 |
| ALM93523.1 | ALM94010.1 | RO02_02495 | RO02_05065 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.781 |
| ALM93523.1 | ALM94162.1 | RO02_02495 | RO02_05880 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.828 |
| ALM93523.1 | ALM94163.1 | RO02_02495 | RO02_05885 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.852 |
| ALM93523.1 | ALM95232.1 | RO02_02495 | RO02_11875 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| ALM93523.1 | ALM95325.1 | RO02_02495 | RO02_12370 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| ALM93523.1 | nifJ | RO02_02495 | RO02_04985 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.787 |
| ALM93523.1 | nikC | RO02_02495 | RO02_11870 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.817 |
| ALM93931.1 | ALM93523.1 | RO02_04640 | RO02_02495 | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.791 |
| ALM93931.1 | ALM93932.1 | RO02_04640 | RO02_04645 | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| ALM93931.1 | ALM94010.1 | RO02_04640 | RO02_05065 | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.872 |
| ALM93931.1 | ALM94163.1 | RO02_04640 | RO02_05885 | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| ALM93931.1 | ALM95232.1 | RO02_04640 | RO02_11875 | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.863 |
| ALM93932.1 | ALM93523.1 | RO02_04645 | RO02_02495 | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.800 |
| ALM93932.1 | ALM93931.1 | RO02_04645 | RO02_04640 | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
| ALM93932.1 | ALM94009.1 | RO02_04645 | RO02_05060 | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.860 |
| ALM93932.1 | ALM94162.1 | RO02_04645 | RO02_05880 | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
| ALM93932.1 | nikC | RO02_04645 | RO02_11870 | Nickel transporter permease NikB; With NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.860 |
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