Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALM93225.1 | guaB | RO02_00920 | RO02_05330 | Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.707 |
| ALM93225.1 | pepT | RO02_00920 | RO02_02560 | Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.413 |
| ALM93535.1 | ALM93537.1 | RO02_02555 | RO02_02565 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| ALM93535.1 | pepT | RO02_02555 | RO02_02560 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.500 |
| ALM93537.1 | ALM93535.1 | RO02_02565 | RO02_02555 | YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| ALM93537.1 | pepT | RO02_02565 | RO02_02560 | YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.773 |
| ALM93969.1 | pepT | RO02_04845 | RO02_02560 | Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.438 |
| ALM95128.1 | guaB | RO02_11230 | RO02_05330 | Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.707 |
| ALM95128.1 | pepT | RO02_11230 | RO02_02560 | Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.413 |
| guaB | ALM93225.1 | RO02_05330 | RO02_00920 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.707 |
| guaB | ALM95128.1 | RO02_05330 | RO02_11230 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.707 |
| guaB | pepT | RO02_05330 | RO02_02560 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | 0.471 |
| pepT | ALM93225.1 | RO02_02560 | RO02_00920 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| pepT | ALM93535.1 | RO02_02560 | RO02_02555 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| pepT | ALM93537.1 | RO02_02560 | RO02_02565 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| pepT | ALM93969.1 | RO02_02560 | RO02_04845 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| pepT | ALM95128.1 | RO02_02560 | RO02_11230 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| pepT | guaB | RO02_02560 | RO02_05330 | Peptidase T; Cleaves a wide range of dipeptides and tripeptides, but does not display activity against larger peptides. May have a role in the survival of F.nucleatum in the subgingival environment of the mouth. Belongs to the peptidase M20B family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.471 |