STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (673 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PAL/histidase family.
 
 0.992
hutI
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
ALM95336.1
Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.932
ALM95334.1
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.925
ALM95009.1
Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.703
ALM94779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.534
ftcD
Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.508
ALM95333.1
Glutamate formiminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.486
ALM95338.1
Urocanate hydratase; Catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.439
ALM93595.1
Sodium:glutamate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
Your Current Organism:
Fusobacterium nucleatum polymorphum
NCBI taxonomy Id: 76857
Other names: ATCC 10953, CCUG 9126, DSM 20482, F. nucleatum subsp. polymorphum, Fusibacterium nucleatum subsp. polymorphum, Fusobacterium nucleatum subsp. polymorphum, Fusobacterium polymorphum, JCM 12990, NCTC 10562
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.