Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALM93628.1Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
ALM93629.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ALM93627.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.877
ALM93106.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.793
ALM93105.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.759
ALM93626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.731
ALM93339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.717
ALM93110.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.672
ALM94564.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.558
ALM93281.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.533
ALM94095.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.532
Your Current Organism:
Fusobacterium nucleatum polymorphum
NCBI taxonomy Id: 76857
Other names: ATCC 10953, CCUG 9126, DSM 20482, F. nucleatum subsp. polymorphum, Fusibacterium nucleatum subsp. polymorphum, Fusobacterium nucleatum subsp. polymorphum, Fusobacterium polymorphum, JCM 12990, NCTC 10562
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