Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALM93669.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
ALM93670.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.978
ALM93671.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.970
ALM93573.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   0.909
ALM94351.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.909
ALM95109.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   0.909
ALM95108.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.791
ALM93571.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.755
ALM94352.1
iron(III) dicitrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.687
ALM93667.1
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
ALM93668.1
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
Your Current Organism:
Fusobacterium nucleatum polymorphum
NCBI taxonomy Id: 76857
Other names: ATCC 10953, CCUG 9126, DSM 20482, F. nucleatum subsp. polymorphum, Fusibacterium nucleatum subsp. polymorphum, Fusobacterium nucleatum subsp. polymorphum, Fusobacterium polymorphum, JCM 12990, NCTC 10562
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