Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALM93293.1 | ALM93823.1 | RO02_01270 | RO02_04060 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 0.485 |
| ALM93293.1 | polA | RO02_01270 | RO02_02395 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.464 |
| ALM93293.1 | rpsO | RO02_01270 | RO02_11040 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.618 |
| ALM93293.1 | rpsT | RO02_01270 | RO02_08300 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.607 |
| ALM93822.1 | ALM93823.1 | RO02_04055 | RO02_04060 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 0.544 |
| ALM93823.1 | ALM93293.1 | RO02_04060 | RO02_01270 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
| ALM93823.1 | ALM93822.1 | RO02_04060 | RO02_04055 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| ALM93823.1 | ALM93824.1 | RO02_04060 | RO02_04065 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| ALM93823.1 | ALM95003.1 | RO02_04060 | RO02_10495 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
| ALM93823.1 | ALM95270.1 | RO02_04060 | RO02_12085 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.500 |
| ALM93823.1 | metG | RO02_04060 | RO02_05495 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.486 |
| ALM93823.1 | nusA | RO02_04060 | RO02_10820 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.502 |
| ALM93823.1 | polA | RO02_04060 | RO02_02395 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.520 |
| ALM93823.1 | rpsO | RO02_04060 | RO02_11040 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.532 |
| ALM93823.1 | rpsT | RO02_04060 | RO02_08300 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.573 |
| ALM93824.1 | ALM93823.1 | RO02_04065 | RO02_04060 | Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 0.483 |
| ALM95003.1 | ALM93823.1 | RO02_10495 | RO02_04060 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. | 0.529 |
| ALM95003.1 | ALM95270.1 | RO02_10495 | RO02_12085 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.465 |
| ALM95003.1 | nusA | RO02_10495 | RO02_10820 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.577 |
| ALM95003.1 | rpsO | RO02_10495 | RO02_11040 | Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.624 |
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