STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM93852.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)    
Predicted Functional Partners:
ALM94564.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.816
ALM93851.1
RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
ALM95117.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.601
ALM93850.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
RO02_03340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.532
ALM94463.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.532
dnaK
Fe-S protein assembly chaperone HscA; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.465
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.448
mnmG-2
tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.448
ALM93320.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.426
Your Current Organism:
Fusobacterium nucleatum polymorphum
NCBI taxonomy Id: 76857
Other names: ATCC 10953, CCUG 9126, DSM 20482, F. nucleatum subsp. polymorphum, Fusibacterium nucleatum subsp. polymorphum, Fusobacterium nucleatum subsp. polymorphum, Fusobacterium polymorphum, JCM 12990, NCTC 10562
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