Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALM94436.1Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
ALM94434.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ALM94435.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ALM93838.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.907
ALM93221.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.878
ALM93698.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.870
ALM93836.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.785
ALM93220.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.628
ALM93697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.628
ALM94437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
ALM94438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.525
Your Current Organism:
Fusobacterium nucleatum polymorphum
NCBI taxonomy Id: 76857
Other names: ATCC 10953, CCUG 9126, DSM 20482, F. nucleatum subsp. polymorphum, Fusibacterium nucleatum subsp. polymorphum, Fusobacterium nucleatum subsp. polymorphum, Fusobacterium polymorphum, JCM 12990, NCTC 10562
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