Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALM94562.1 | ALM94566.1 | RO02_08005 | RO02_08025 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| ALM94562.1 | ALM94570.1 | RO02_08005 | RO02_08045 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| ALM94562.1 | ALM94574.1 | RO02_08005 | RO02_08070 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.699 |
| ALM94562.1 | ALM94576.1 | RO02_08005 | RO02_08080 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DhaG protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.730 |
| ALM94562.1 | ALM94577.1 | RO02_08005 | RO02_08085 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde dehydrogenase EutE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.586 |
| ALM94562.1 | ALM95393.1 | RO02_08005 | RO02_08050 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.654 |
| ALM94562.1 | pduC | RO02_08005 | RO02_08030 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.719 |
| ALM94562.1 | pduD | RO02_08005 | RO02_08035 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
| ALM94562.1 | pduE | RO02_08005 | RO02_08040 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
| ALM94566.1 | ALM94562.1 | RO02_08025 | RO02_08005 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| ALM94566.1 | ALM94570.1 | RO02_08025 | RO02_08045 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| ALM94566.1 | ALM94574.1 | RO02_08025 | RO02_08070 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.830 |
| ALM94566.1 | ALM94576.1 | RO02_08025 | RO02_08080 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | DhaG protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| ALM94566.1 | ALM94577.1 | RO02_08025 | RO02_08085 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde dehydrogenase EutE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| ALM94566.1 | ALM95393.1 | RO02_08025 | RO02_08050 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| ALM94566.1 | pduC | RO02_08025 | RO02_08030 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.961 |
| ALM94566.1 | pduD | RO02_08025 | RO02_08035 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
| ALM94566.1 | pduE | RO02_08025 | RO02_08040 | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| ALM94570.1 | ALM94562.1 | RO02_08045 | RO02_08005 | Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| ALM94570.1 | ALM94566.1 | RO02_08045 | RO02_08025 | Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Microcompartment protein PduB; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
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