Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALM93489.1 | ALM94342.1 | RO02_02310 | RO02_06815 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.641 |
| ALM93489.1 | ALM94741.1 | RO02_02310 | RO02_08935 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.520 |
| ALM94342.1 | ALM93489.1 | RO02_06815 | RO02_02310 | MFS transporter; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.641 |
| ALM94342.1 | ALM94741.1 | RO02_06815 | RO02_08935 | MFS transporter; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.548 |
| ALM94342.1 | pheT | RO02_06815 | RO02_10110 | MFS transporter; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.659 |
| ALM94738.1 | ALM94740.1 | RO02_08920 | RO02_08930 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
| ALM94738.1 | ALM94741.1 | RO02_08920 | RO02_08935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.487 |
| ALM94738.1 | pnp | RO02_08920 | RO02_08910 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.725 |
| ALM94738.1 | rsmH | RO02_08920 | RO02_08925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.617 |
| ALM94740.1 | ALM94738.1 | RO02_08930 | RO02_08920 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
| ALM94740.1 | ALM94741.1 | RO02_08930 | RO02_08935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.773 |
| ALM94740.1 | ALM95400.1 | RO02_08930 | RO02_08940 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
| ALM94740.1 | rsmH | RO02_08930 | RO02_08925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.773 |
| ALM94741.1 | ALM93489.1 | RO02_08935 | RO02_02310 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
| ALM94741.1 | ALM94342.1 | RO02_08935 | RO02_06815 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | MFS transporter; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.548 |
| ALM94741.1 | ALM94738.1 | RO02_08935 | RO02_08920 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
| ALM94741.1 | ALM94740.1 | RO02_08935 | RO02_08930 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| ALM94741.1 | ALM95400.1 | RO02_08935 | RO02_08940 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
| ALM94741.1 | guaA | RO02_08935 | RO02_12270 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.463 |
| ALM94741.1 | pheT | RO02_08935 | RO02_10110 | RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.455 |
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