Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hsdMRestriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)    
Predicted Functional Partners:
hsdS2
Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
ALF17104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
hsdR
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.957
ALF17883.1
Disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.629
purC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.549
ALF17106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.524
ALF17102.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.451
ALF17101.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
ALF17978.1
Cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.407
Your Current Organism:
Fusobacterium nucleatum animalis
NCBI taxonomy Id: 76859
Other names: ATCC 51191, CCUG 32879, CIP 104879, DSM 19679, F. nucleatum subsp. animalis, Fusibacterium nucleatum subsp. animalis, Fusobacterium animalis, Fusobacterium nucleatum subsp. animalis, JCM 11025, NCTC 12276
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