Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALF17278.1 | ALF17466.1 | RN98_03460 | RN98_04530 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| ALF17278.1 | oppA2 | RN98_03460 | RN98_04525 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
| ALF17278.1 | oppD2 | RN98_03460 | RN98_04540 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.793 |
| ALF17278.1 | oppF3 | RN98_03460 | RN98_04545 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.769 |
| ALF17466.1 | ALF17278.1 | RN98_04530 | RN98_03460 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| ALF17466.1 | ALF18449.1 | RN98_04530 | RN98_09760 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| ALF17466.1 | dppC3 | RN98_04530 | RN98_04535 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.966 |
| ALF17466.1 | dppC4 | RN98_04530 | RN98_05560 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.862 |
| ALF17466.1 | nikC | RN98_04530 | RN98_02120 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| ALF17466.1 | nikC-2 | RN98_04530 | RN98_02210 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.841 |
| ALF17466.1 | oppA2 | RN98_04530 | RN98_04525 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.923 |
| ALF17466.1 | oppC | RN98_04530 | RN98_02245 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
| ALF17466.1 | oppD2 | RN98_04530 | RN98_04540 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.946 |
| ALF17466.1 | oppF3 | RN98_04530 | RN98_04545 | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.945 |
| ALF18449.1 | ALF17466.1 | RN98_09760 | RN98_04530 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| ALF18449.1 | oppA2 | RN98_09760 | RN98_04525 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.674 |
| ALF18449.1 | oppD2 | RN98_09760 | RN98_04540 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.848 |
| ALF18449.1 | oppF3 | RN98_09760 | RN98_04545 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.825 |
| dppC3 | ALF17466.1 | RN98_04535 | RN98_04530 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.966 |
| dppC3 | oppA2 | RN98_04535 | RN98_04525 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
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