STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALF17691.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
yqeH
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
trmFO
tRNA (uracil-5-)-methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
       0.778
ALF17693.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
pilB
General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.759
ftsY
Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.744
gspF
General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.736
ALF17689.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.681
ALF17688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
dprA
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.558
ALF16739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.501
Your Current Organism:
Fusobacterium nucleatum animalis
NCBI taxonomy Id: 76859
Other names: ATCC 51191, CCUG 32879, CIP 104879, DSM 19679, F. nucleatum subsp. animalis, Fusibacterium nucleatum subsp. animalis, Fusobacterium animalis, Fusobacterium nucleatum subsp. animalis, JCM 11025, NCTC 12276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.