Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALF17838.1 | dppA | RN98_06495 | RN98_06485 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| ALF17838.1 | yhfE | RN98_06495 | RN98_06480 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| bioB | bioD | RN98_06475 | RN98_06470 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.999 |
| bioB | yhfE | RN98_06475 | RN98_06480 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| bioD | bioB | RN98_06470 | RN98_06475 | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.999 |
| bioD | yhfE | RN98_06470 | RN98_06480 | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
| dppA | ALF17838.1 | RN98_06485 | RN98_06495 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| dppA | yhfE | RN98_06485 | RN98_06480 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
| yhfE | ALF17838.1 | RN98_06480 | RN98_06495 | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| yhfE | bioB | RN98_06480 | RN98_06475 | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.495 |
| yhfE | bioD | RN98_06480 | RN98_06470 | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.480 |
| yhfE | dppA | RN98_06480 | RN98_06485 | Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |