Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hslJHeat-shock protein HslJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
macB
Macrolide transporter; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
    
   0.815
ALF17924.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.705
crr
PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
ALF17921.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
ALF17946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.526
tolC2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.522
ALF17925.1
Cobinamide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.483
cobC
Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.
       0.475
radC
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
Your Current Organism:
Fusobacterium nucleatum animalis
NCBI taxonomy Id: 76859
Other names: ATCC 51191, CCUG 32879, CIP 104879, DSM 19679, F. nucleatum subsp. animalis, Fusibacterium nucleatum subsp. animalis, Fusobacterium animalis, Fusobacterium nucleatum subsp. animalis, JCM 11025, NCTC 12276
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