Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALF17912.1 | ALF18272.1 | RN98_06890 | RN98_08825 | Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
ALF18269.1 | ALF18272.1 | RN98_08810 | RN98_08825 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.531 |
ALF18269.1 | gntP4 | RN98_08810 | RN98_08815 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
ALF18272.1 | ALF17912.1 | RN98_08825 | RN98_06890 | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
ALF18272.1 | ALF18269.1 | RN98_08825 | RN98_08810 | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.531 |
ALF18272.1 | dsdA | RN98_08825 | RN98_08820 | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | 0.718 |
ALF18272.1 | gntP4 | RN98_08825 | RN98_08815 | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
dsdA | ALF18272.1 | RN98_08820 | RN98_08825 | Serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
dsdA | gntP4 | RN98_08820 | RN98_08815 | Serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
gntP4 | ALF18269.1 | RN98_08815 | RN98_08810 | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
gntP4 | ALF18272.1 | RN98_08815 | RN98_08825 | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
gntP4 | dsdA | RN98_08815 | RN98_08820 | D-serine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily. | 0.693 |