Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALF16795.1 | ALF18639.1 | RN98_00635 | RN98_10840 | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
| ALF16795.1 | apt | RN98_00635 | RN98_02440 | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.900 |
| ALF16795.1 | deoD | RN98_00635 | RN98_03400 | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| ALF16795.1 | hpt | RN98_00635 | RN98_03585 | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.923 |
| ALF18639.1 | ALF16795.1 | RN98_10840 | RN98_00635 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
| ALF18639.1 | apt | RN98_10840 | RN98_02440 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.499 |
| ALF18639.1 | ddl | RN98_10840 | RN98_02580 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.494 |
| ALF18639.1 | deoD | RN98_10840 | RN98_03400 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| ALF18639.1 | hpt | RN98_10840 | RN98_03585 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.499 |
| ALF18639.1 | sulD | RN98_10840 | RN98_00850 | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.836 |
| apt | ALF16795.1 | RN98_02440 | RN98_00635 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| apt | ALF18639.1 | RN98_02440 | RN98_10840 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
| apt | deoD | RN98_02440 | RN98_03400 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| apt | hpt | RN98_02440 | RN98_03585 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.923 |
| ddl | ALF18639.1 | RN98_02580 | RN98_10840 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| deoD | ALF16795.1 | RN98_03400 | RN98_00635 | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| deoD | ALF18639.1 | RN98_03400 | RN98_10840 | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| deoD | apt | RN98_03400 | RN98_02440 | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.915 |
| deoD | hpt | RN98_03400 | RN98_03585 | Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.916 |
| hpt | ALF16795.1 | RN98_03585 | RN98_00635 | Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.923 |
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