STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV18859.1KEGG: alv:Alvin_2321 hypothetical protein. (130 aa)    
Predicted Functional Partners:
EGV18857.1
KEGG: cpc:Cpar_1216 hypothetical protein.
       0.773
EGV18858.1
Hypothetical protein; KEGG: dat:HRM2_34120 putative nicotinamidase-related amidohydrolase.
       0.773
EGV18860.1
Hypothetical protein.
       0.773
EGV17581.1
PFAM: O-antigen ligase-related; KEGG: alv:Alvin_3062 O-antigen polymerase.
 
     0.667
EGV19998.1
PFAM: Protein of unknown function DUF900, hydrolase-like; KEGG: caa:Caka_1031 protein of unknown function DUF900 hydrolase family protein.
  
     0.663
EGV18861.1
PFAM: Protein of unknown function DUF2233, periplasmic; KEGG: alv:Alvin_1822 hypothetical protein.
 
     0.662
EGV20583.1
KEGG: alv:Alvin_1666 hypothetical protein.
  
     0.589
EGV18012.1
KEGG: alv:Alvin_3007 hypothetical protein.
  
     0.586
EGV16290.1
Hypothetical protein; KEGG: ate:Athe_2259 dynamin family protein.
  
     0.586
EGV19052.1
KEGG: mca:MCA1539 hypothetical protein.
  
     0.564
Your Current Organism:
Thiocapsa marina
NCBI taxonomy Id: 768671
Other names: T. marina 5811, Thiocapsa marina 5811, Thiocapsa marina str. 5811, Thiocapsa marina strain 5811
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.