Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EGV17658.1KEGG: cts:Ctha_1463 tetratricopeptide domain-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat. (186 aa)    
Predicted Functional Partners:
EGV16049.1
PFAM: Mammalian cell entry related; KEGG: rru:Rru_A2910 hypothetical protein.
  
     0.760
EGV16050.1
PFAM: Protein of unknown function DUF330; KEGG: rru:Rru_A2911 ABC-type uncharacterized transport system auxiliary component-like.
  
     0.759
EGV18239.1
PFAM: Ryanodine receptor Ryr; KEGG: mpd:MCP_2384 hypothetical protein.
  
   0.746
EGV16823.1
Hypothetical protein; KEGG: ccb:Clocel_3593 hemerythrin HHE cation binding domain-containing protein.
  
     0.719
EGV18011.1
KEGG: alv:Alvin_3006 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like.
 
 
 0.667
EGV15925.1
KEGG: alv:Alvin_1361 hypothetical protein.
  
     0.657
EGV19605.1
KEGG: alv:Alvin_1307 hypothetical protein.
  
     0.642
EGV16851.1
PFAM: Flavin reductase-like, FMN-binding; KEGG: cyn:Cyan7425_0319 flavin reductase domain protein FMN-binding.
  
     0.636
EGV17246.1
KEGG: alv:Alvin_1761 hypothetical protein.
  
     0.631
EGV18016.1
KEGG: alv:Alvin_3011 general secretion pathway protein J.
  
     0.629
Your Current Organism:
Thiocapsa marina
NCBI taxonomy Id: 768671
Other names: T. marina 5811, Thiocapsa marina 5811, Thiocapsa marina str. 5811, Thiocapsa marina strain 5811
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