Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
soxNCytochrome b related protein. (479 aa)    
Predicted Functional Partners:
soxL
Rieske iron-sulfur protein.
 
 0.999
fqoH/nuoH
Ferredoxin:quinone oxidoreductase, complex I, subunit H.
 
 
 0.972
nuoH
NADH dehydrogenase I chain H.
 
 
 0.972
TTX_2025
Family M16 protease.
    
 0.960
nuoN
NADH dehydrogenase I chain N.
 
 
 0.948
fqoN/nuoN
Ferredoxin:quinone oxidoreductase, complex I, subunit N.
 
 
 0.945
fqoA/nuoA
Ferredoxin:quinone oxidoreductase, complex I, subunit A.
  
 
 0.932
nuoA
Putative NADH-ubiquinone oxidoreductase chain A, subunit 3.
  
 
 0.932
fqoI/nuoI
Ferredoxin:quinone oxidoreductase, complex I, subunit I.
  
 
 0.931
nuoI
NADH dehydrogenase I chain I.
  
 
 0.931
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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