Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TTX_0791Conserved hypothetical protein. (134 aa)    
Predicted Functional Partners:
fabG-2
3-oxoacyl-[acyl-carrier protein] reductase.
       0.752
TTX_0764
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
     0.646
TTX_1502
HAD superfamily hydrolase.
  
     0.588
TTX_0304
recA-superfamily ATPase.
 
     0.552
TTX_0793
Permease of the major facilitator superfamily.
       0.546
TTX_0794
D-lactate dehydrogenase.
       0.546
TTX_0795
Conserved hypothetical iron-sulfur protein with C-terminal seven iron ferredoxin domain.
       0.546
TTX_1305
Predicted glycosyl transferase.
  
     0.541
TTX_1885
Conserved hypothetical protein with a metal-binding cluster.
  
     0.524
TTX_1548
CRISPR-associated protein Cas4, RecB family exonuclease; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
  
     0.515
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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