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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
epf1 protein (Thermoproteus tenax) - STRING interaction network
"epf1" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epf1annotation not available (424 aa)    
Predicted Functional Partners:
rpl24p
50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit (126 aa)
              0.695
thrS
annotation not available (615 aa)
   
        0.662
TTX_0947
annotation not available (113 aa)
              0.625
TTX_1585
annotation not available (437 aa)
     
 
  0.612
snt-6
annotation not available (360 aa)
 
   
  0.594
mvk
Mevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily (314 aa)
   
        0.591
TTX_0684
annotation not available (311 aa)
   
 
  0.576
rps4e
annotation not available (235 aa)
   
        0.555
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (601 aa)
   
   
  0.547
mre11
annotation not available (378 aa)
   
 
  0.514
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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