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rpl18e protein (Thermoproteus tenax) - STRING interaction network
"rpl18e" - 50S ribosomal protein L18e in Thermoproteus tenax
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl18e50S ribosomal protein L18e (122 aa)    
Predicted Functional Partners:
rpl13e
Ribosomal protein L13e fused to a ribosomal protein L15-like domain (161 aa)
     
  0.999
rps9
30S ribosomal protein S9p (168 aa)
   
  0.999
rpl13
50S ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (174 aa)
   
  0.999
rpl21e
50S ribosomal protein L21e (98 aa)
 
  0.999
rps6e
30S ribosomal protein S6e (149 aa)
   
  0.999
rpl19e
Putative 50S ribosomal protein L19e; Binds to the 23S rRNA (147 aa)
 
  0.999
rpl32e
Putative 50S ribosomal protein L32e (162 aa)
 
  0.999
rpl18
50S ribosomal protein L18p; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (203 aa)
 
  0.999
rpl31e
Ribosomal protein L31e (91 aa)
   
  0.999
rpl15e
50S ribosomal protein L15e (184 aa)
   
  0.999
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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