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STRINGSTRING
TTX_1996 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1996" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1996annotation not available (120 aa)    
Predicted Functional Partners:
rps3p
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (216 aa)
   
 
  0.970
rps17p
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (147 aa)
 
 
  0.966
rps14p
30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles (54 aa)
   
 
  0.965
rps8p
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (128 aa)
   
 
  0.964
eif-1A
Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (97 aa)
   
 
  0.961
rps6e
annotation not available (149 aa)
   
 
  0.956
rps17e
annotation not available (75 aa)
   
 
  0.954
rps27e
annotation not available (67 aa)
   
 
  0.954
rps25e
annotation not available (112 aa)
     
 
  0.947
rps10p
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (106 aa)
     
 
  0.946
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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