STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpX1Protease htpX homolog 1; Belongs to the peptidase M48B family. (308 aa)    
Predicted Functional Partners:
TTX_1080
Sugar kinase superfamily enzyme.
  
    0.724
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.720
hom
Homoserine dehydrogenase.
  
  
 0.678
TTX_0925
Metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain.
  
    0.669
yebQ
Efflux pump antibiotic resistance protein.
 
   
 0.654
napA
Na(+)/H(+) antiporter.
 
     0.651
fumC
Fumarate hydratase class II (fumarase).
  
  
 0.595
moxR
MoxR-like ATPase.
  
    0.563
TTX_0873
MoxR-like ATPase.
  
    0.563
citE
Citrate lyase beta subunit.
  
  
 0.545
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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