Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argG | asd | TTX_0123 | TTX_2009 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate-semialdehyde dehydrogenase. | 0.748 |
argG | dapA | TTX_0123 | TTX_0539 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Dihydrodipicolinate synthase. | 0.521 |
argG | glyA | TTX_0123 | TTX_1905 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.466 |
argG | hom | TTX_0123 | TTX_2007 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Homoserine dehydrogenase. | 0.484 |
argG | kdgA | TTX_0123 | TTX_1156a | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 2-keto-3-deoxy-(6-phospho-) gluconate aldolase. | 0.455 |
argG | lysC | TTX_0123 | TTX_2010 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate kinase. | 0.905 |
argG | lysY/argC | TTX_0123 | TTX_0120 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | N-acetyl-gamma-aminoadipyl-phosphate/N-acetyl- gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.987 |
argG | thrC | TTX_0123 | TTX_2011 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.571 |
asd | argG | TTX_2009 | TTX_0123 | Aspartate-semialdehyde dehydrogenase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.748 |
asd | dapA | TTX_2009 | TTX_0539 | Aspartate-semialdehyde dehydrogenase. | Dihydrodipicolinate synthase. | 0.973 |
asd | glyA | TTX_2009 | TTX_1905 | Aspartate-semialdehyde dehydrogenase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.696 |
asd | hom | TTX_2009 | TTX_2007 | Aspartate-semialdehyde dehydrogenase. | Homoserine dehydrogenase. | 0.986 |
asd | kdgA | TTX_2009 | TTX_1156a | Aspartate-semialdehyde dehydrogenase. | 2-keto-3-deoxy-(6-phospho-) gluconate aldolase. | 0.738 |
asd | lysC | TTX_2009 | TTX_2010 | Aspartate-semialdehyde dehydrogenase. | Aspartate kinase. | 0.999 |
asd | lysY/argC | TTX_2009 | TTX_0120 | Aspartate-semialdehyde dehydrogenase. | N-acetyl-gamma-aminoadipyl-phosphate/N-acetyl- gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.736 |
asd | pgk | TTX_2009 | TTX_1535 | Aspartate-semialdehyde dehydrogenase. | Phosphoglycerate kinase. | 0.751 |
asd | thrB | TTX_2009 | TTX_0477 | Aspartate-semialdehyde dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.766 |
asd | thrC | TTX_2009 | TTX_2011 | Aspartate-semialdehyde dehydrogenase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.919 |
dapA | argG | TTX_0539 | TTX_0123 | Dihydrodipicolinate synthase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.521 |
dapA | asd | TTX_0539 | TTX_2009 | Dihydrodipicolinate synthase. | Aspartate-semialdehyde dehydrogenase. | 0.973 |
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