STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_2016succinyl-CoA synthetase alpha subunit. (468 aa)    
Predicted Functional Partners:
acd-5
acetyl-CoA synthetase.
 
 0.999
oorCA
2-oxoacid ferredoxin oxidoreductase, gamma-alpha subunit.
  
 0.933
oorCA-2
2-oxoacid ferredoxin oxidoreductase, gamma-alpha subunit.
  
 0.933
acaB
acetyl-CoA C-acyltransferase.
  
 
 0.921
acs-4
acetyl-CoA synthetase.
    
 0.921
acaB-4
acetyl-CoA acyltransferase.
  
 
 0.921
acaB-3
acetyl-CoA C-acyltransferase.
  
 
 0.921
acs-2
acetyl-CoA synthetase 2.
    
 0.921
acs-3
Acetyl-coenzyme A synthetase.
    
 0.921
acs-2-2
acetyl-CoA synthetase 2.
    
 0.921
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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