Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fdxFerredoxin. (73 aa)    
Predicted Functional Partners:
TTX_2020
Transcriptional regulator, HTH domain fused to Zn-ribbon.
       0.773
TTX_2021
Hypothetical protein.
       0.773
TTX_0439
Adenylylsulfate reductase subunit beta.
     
 0.681
cydA
Cytochrome bd-type quinol oxidase, subunit 1.
   
  
 0.637
cydA-2
Cytochrome bd-type quinol oxidase, subunit 1-like protein.
   
  
 0.637
TTX_1318
Fe-S oxidoreductases.
  
  
 0.630
soxN
Cytochrome b related protein.
     
 0.619
soxL
Rieske iron-sulfur protein.
     
 0.618
cbsA
Cytochrome b558/566, subunit A.
      
 0.618
cbsB
Cytochrome b573 membrane subunit.
      
 0.618
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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