STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSU_0277Type I restriction-modification system specificity subunit. (295 aa)    
Predicted Functional Partners:
MSU_0279
Type I restriction-modification system, N-6 DNA methylase family protein.
  
   0.831
MSU_0276
5'-3' exonuclease, DNA polymerase I-like protein.
   
   0.753
MSU_0799
Type I restriction-modification system, N-6 DNA Methylase family protein.
  
   0.667
MSU_0278
Putative type I restriction-modification system specificity subunit.
       0.661
MSU_0280
Type I site-specific deoxyribonuclease, HsdR family protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.644
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
   0.487
MSU_0275
Hypothetical protein.
       0.484
polA2
5'-3' exonuclease, DNA polymerase I like protein.
   
   0.480
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
   0.441
MSU_0274
Type I restriction-modification system specificity subunit.
      
0.436
Your Current Organism:
Mycoplasma suis
NCBI taxonomy Id: 768700
Other names: M. suis str. Illinois, Mycoplasma suis Illinois, Mycoplasma suis str. Illinois, Mycoplasma suis strain Illinois
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