frr protein (Mycoplasma suis) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

co-expression

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[Homology]

Score

frr

Ribosome recycling factor. (195 aa)

Predicted Functional Partners:

rpsB

0.992

rplM

0.990

rplK

0.987

rpsI

0.987

rplQ

0.987

rpsO

0.986

rplT

0.986

rplC

0.985

rplS

0.985

rpsL

0.985

Your Current Organism:

Mycoplasma suis

NCBI taxonomy Id: 768700
Other names: M. suis str. Illinois, Mycoplasma suis Illinois, Mycoplasma suis str. Illinois, Mycoplasma suis strain Illinois

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
frr	rplC	MSU_0502	MSU_0419	Ribosome recycling factor.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.985
frr	rplK	MSU_0502	MSU_0295	Ribosome recycling factor.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.987
frr	rplM	MSU_0502	MSU_0538	Ribosome recycling factor.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
frr	rplQ	MSU_0502	MSU_0458	Ribosome recycling factor.	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.987
frr	rplS	MSU_0502	MSU_0455	Ribosome recycling factor.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.985
frr	rplT	MSU_0502	MSU_0726	Ribosome recycling factor.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.986
frr	rpsB	MSU_0502	MSU_0353	Ribosome recycling factor.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.992
frr	rpsI	MSU_0502	MSU_0413	Ribosome recycling factor.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.987
frr	rpsL	MSU_0502	MSU_0470	Ribosome recycling factor.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.985
frr	rpsO	MSU_0502	MSU_0293	Ribosome recycling factor.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.986
rplC	frr	MSU_0419	MSU_0502	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosome recycling factor.	0.985
rplC	rplK	MSU_0419	MSU_0295	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplC	rplM	MSU_0419	MSU_0538	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplQ	MSU_0419	MSU_0458	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.994
rplC	rplS	MSU_0419	MSU_0455	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplC	rplT	MSU_0419	MSU_0726	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
rplC	rpsB	MSU_0419	MSU_0353	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rplC	rpsI	MSU_0419	MSU_0413	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.993
rplC	rpsL	MSU_0419	MSU_0470	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.993
rplC	rpsO	MSU_0419	MSU_0293	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.992