STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AET68136.1PFAM: Nitroreductase family. (216 aa)    
Predicted Functional Partners:
AET68135.1
Hypothetical protein.
       0.608
AET69225.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis cyclodehydratase domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
  
 0.552
AET68137.1
Transcriptional regulator; PFAM: MarR family.
 
    0.550
AET69214.1
Hypothetical protein; PFAM: YcaO-like family; TIGRFAM: uncharacterized domain.
  
  
 0.540
birA
birA, biotin-(acetyl-CoA-carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.522
birA-2
birA, biotin-(acetyl-CoA-carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.522
AET66336.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.514
AET67077.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.514
AET67078.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.514
AET67635.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
  
 0.514
Your Current Organism:
Desulfosporosinus orientis
NCBI taxonomy Id: 768706
Other names: D. orientis DSM 765, Desulfosporosinus orientis DSM 765, Desulfosporosinus orientis Singapore I, Desulfosporosinus orientis str. DSM 765, Desulfosporosinus orientis strain DSM 765
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.