STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ88792.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (409 aa)    
Predicted Functional Partners:
EHQ89400.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
EHQ88795.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.979
EHQ88793.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.973
EHQ88796.1
ABC-type branched-chain amino acid transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.973
EHQ88794.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
EHQ90836.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
EHQ91802.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
EHQ91801.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.953
EHQ92359.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.953
EHQ90835.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.952
Your Current Organism:
Desulfosporosinus youngiae
NCBI taxonomy Id: 768710
Other names: D. youngiae DSM 17734, Desulfosporosinus youngiae DSM 17734, Desulfosporosinus youngiae JW/YJL-B18, Desulfosporosinus youngiae str. DSM 17734, Desulfosporosinus youngiae strain DSM 17734
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