STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ89106.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
EHQ89080.1
Hypothetical protein; PFAM: 3-demethylubiquinone-9 3-methyltransferase.
  
     0.559
EHQ90603.1
Hypothetical protein; PFAM: 3-demethylubiquinone-9 3-methyltransferase.
  
     0.503
EHQ89053.1
Hypothetical protein; PFAM: Domain of unknown function (DU1801).
  
     0.473
EHQ88016.1
Hypothetical protein.
  
     0.452
EHQ89105.1
Hypothetical protein.
       0.442
EHQ89107.1
PFAM: Transcriptional regulator PadR-like family.
       0.401
EHQ89108.1
PFAM: Protein of unknown function (DUF2812).
       0.401
EHQ89435.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Desulfosporosinus youngiae
NCBI taxonomy Id: 768710
Other names: D. youngiae DSM 17734, Desulfosporosinus youngiae DSM 17734, Desulfosporosinus youngiae JW/YJL-B18, Desulfosporosinus youngiae str. DSM 17734, Desulfosporosinus youngiae strain DSM 17734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.