STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ90239.1PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme. (61 aa)    
Predicted Functional Partners:
EHQ87384.1
2-keto-4-pentenoate hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxopent-4-enoate hydratase.
 
  
 0.773
EHQ90240.1
Putative endonuclease; Contains URI domain; PFAM: GIY-YIG catalytic domain.
       0.755
mqnA
Putative periplasmic solute-binding protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.746
EHQ87670.1
PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme.
     
  0.711
EHQ90242.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family.
       0.711
EHQ90439.1
PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme.
     
  0.662
EHQ89449.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
    
 0.576
EHQ90729.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
    
 0.576
EHQ90828.1
PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; Belongs to the aldehyde dehydrogenase family.
    
 0.576
Your Current Organism:
Desulfosporosinus youngiae
NCBI taxonomy Id: 768710
Other names: D. youngiae DSM 17734, Desulfosporosinus youngiae DSM 17734, Desulfosporosinus youngiae JW/YJL-B18, Desulfosporosinus youngiae str. DSM 17734, Desulfosporosinus youngiae strain DSM 17734
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.