STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019735_00143Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_002019735_00142
Unannotated protein.
  
  
 0.912
GCA_002019735_00141
Unannotated protein.
 
  
 0.910
GCA_002019735_03319
Unannotated protein.
    
   0.770
GCA_002019735_02611
Unannotated protein.
  
   
 0.769
GCA_002019735_00935
Unannotated protein.
    
   0.757
GCA_002019735_01020
Unannotated protein.
  
 
 
 0.756
GCA_002019735_02775
Unannotated protein.
   
   0.755
GCA_002019735_02041
Unannotated protein.
  
  
  0.745
GCA_002019735_00202
Unannotated protein.
    
   0.732
GCA_002019735_00112
Unannotated protein.
    
   0.731
Your Current Organism:
Salipaludibacillus agaradhaerens
NCBI taxonomy Id: 76935
Other names: ATCC 700163, Bacillus agaradhaerens, CIP 105302, DSM 8721, LMG 17948, LMG:17948, S. agaradhaerens, strain PN-105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.