STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019735_01100Unannotated protein. (424 aa)    
Predicted Functional Partners:
GCA_002019735_01099
Unannotated protein.
 
  
 0.956
GCA_002019735_03338
Unannotated protein.
 
 0.916
GCA_002019735_02729
Unannotated protein.
  
 0.877
GCA_002019735_02595
Unannotated protein.
   
 0.851
GCA_002019735_03344
Unannotated protein.
  
 
 0.846
GCA_002019735_00422
Unannotated protein.
   
  0.726
GCA_002019735_00395
Unannotated protein.
    
  0.710
GCA_002019735_00793
Unannotated protein.
    
  0.710
GCA_002019735_01084
Unannotated protein.
 
 
 0.700
GCA_002019735_00982
Unannotated protein.
  
  
 0.691
Your Current Organism:
Salipaludibacillus agaradhaerens
NCBI taxonomy Id: 76935
Other names: ATCC 700163, Bacillus agaradhaerens, CIP 105302, DSM 8721, LMG 17948, LMG:17948, S. agaradhaerens, strain PN-105
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.