STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019735_01642Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_002019735_01640
Unannotated protein.
 
 
 0.997
GCA_002019735_01641
Unannotated protein.
 
  
 0.993
GCA_002019735_02968
Unannotated protein.
 
 
 0.971
GCA_002019735_00514
Unannotated protein.
  
 
 0.844
GCA_002019735_03272
Unannotated protein.
    
   0.603
GCA_002019735_02458
Unannotated protein.
    
  0.596
GCA_002019735_00126
Unannotated protein.
    
  0.531
GCA_002019735_02159
Unannotated protein.
    
  0.531
GCA_002019735_01333
Unannotated protein.
 
   
 0.424
GCA_002019735_01836
Unannotated protein.
     
 0.414
Your Current Organism:
Salipaludibacillus agaradhaerens
NCBI taxonomy Id: 76935
Other names: ATCC 700163, Bacillus agaradhaerens, CIP 105302, DSM 8721, LMG 17948, LMG:17948, S. agaradhaerens, strain PN-105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.