Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUU39218.1Chitinase. (320 aa)    
Predicted Functional Partners:
CUU39219.1
Chitinase.
 
    
0.820
CUU39220.1
Chitinase.
 
    
0.815
CUU39217.1
Hypothetical protein.
       0.572
CUU39216.1
Hypothetical protein.
       0.459
CUU38915.1
Cell division protein FtsK.
    
   0.434
CUU40380.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.434
CUU39718.1
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
   
   0.414
Your Current Organism:
Helicobacter typhlonius
NCBI taxonomy Id: 76936
Other names: ATCC BAA-367, CCUG 48335, CIP 107729, H. typhlonius, Helicobacter typhlonicus, Helicobacter typhlonius Franklin et al. 2002, MIT 97-6810
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.