STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUU39743.1Molybdopterin biosynthesis protein MoeB. (225 aa)    
Predicted Functional Partners:
surE
5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.660
CUU39741.1
N-carbamoylputrescine amidase.
       0.627
CUU39748.1
FIG00638667: Hypothetical protein.
  
    0.582
CUU39747.1
Polyprenyl synthetase family protein; Octaprenyl diphosphate synthase / Dimethylallyltransferase / (2E,6E)-farnesyl diphosphate synthase / Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
       0.554
CUU39749.1
FIG000557: Hypothetical protein co-occurring with RecR; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.547
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.547
rpoB
DNA-directed RNA polymerase beta subunit / DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.461
CUU39270.1
Putative protease.
  
     0.424
Your Current Organism:
Helicobacter typhlonius
NCBI taxonomy Id: 76936
Other names: ATCC BAA-367, CCUG 48335, CIP 107729, H. typhlonius, Helicobacter typhlonicus, Helicobacter typhlonius Franklin et al. 2002, MIT 97-6810
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.