Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CUU39856.1Hemerythrin-like iron-binding protein. (155 aa)    
Predicted Functional Partners:
CUU39652.1
Predicted secreted protein.
  
     0.707
CUU39857.1
Hemerythrin-like iron-binding protein.
 
    
0.682
CUU39500.1
Hypothetical protein.
  
     0.582
CUU39855.1
Hypothetical protein.
       0.572
CUU40749.1
FIG00711941: Hypothetical protein.
  
     0.569
CUU38910.1
Hypothetical protein.
  
     0.549
CUU39604.1
Hypothetical protein.
  
     0.454
napG
Ferredoxin-type protein NapG (periplasmic nitrate reductase).
  
     0.454
CUU40344.1
Nitrate reductase cytochrome c550-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
     0.420
CUU39113.1
Predicted signal transduction protein.
  
     0.417
Your Current Organism:
Helicobacter typhlonius
NCBI taxonomy Id: 76936
Other names: ATCC BAA-367, CCUG 48335, CIP 107729, H. typhlonius, Helicobacter typhlonicus, Helicobacter typhlonius Franklin et al. 2002, MIT 97-6810
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