Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CUU40883.1FIG00710306: Hypothetical protein. (66 aa)    
Predicted Functional Partners:
ccoP
Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
       0.818
CUU40885.1
Cytochrome c oxidase subunit CcoQ.
       0.818
ccoO
Cytochrome c oxidase subunit CcoO.
       0.818
ccoN
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
       0.798
CUU40882.1
FIG00710278: Hypothetical protein.
     
 0.607
CUU40881.1
Predicted secreted protein.
     
 0.585
CUU40879.1
Hypothetical protein.
       0.551
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.538
CUU40878.1
Hypothetical protein.
       0.505
CUU40880.1
FIG00712732: Hypothetical protein.
       0.468
Your Current Organism:
Helicobacter typhlonius
NCBI taxonomy Id: 76936
Other names: ATCC BAA-367, CCUG 48335, CIP 107729, H. typhlonius, Helicobacter typhlonicus, Helicobacter typhlonius Franklin et al. 2002, MIT 97-6810
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