Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BV98_000686 | BV98_000822 | GCA_002080435_03634 | GCA_002080435_01968 | Unannotated protein. | Unannotated protein. | 0.661 |
BV98_000686 | BV98_002525 | GCA_002080435_03634 | GCA_002080435_00022 | Unannotated protein. | Unannotated protein. | 0.960 |
BV98_000686 | BV98_002527 | GCA_002080435_03634 | GCA_002080435_00024 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.695 |
BV98_000686 | BV98_002529 | GCA_002080435_03634 | GCA_002080435_00026 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.967 |
BV98_000686 | BV98_003889 | GCA_002080435_03634 | GCA_002080435_03812 | Unannotated protein. | Unannotated protein. | 0.506 |
BV98_000686 | acpP | GCA_002080435_03634 | GCA_002080435_00025 | Unannotated protein. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.967 |
BV98_000686 | fabH | GCA_002080435_03634 | GCA_002080435_02073 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.865 |
BV98_000686 | fabZ | GCA_002080435_03634 | GCA_002080435_00731 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.882 |
BV98_000822 | BV98_000686 | GCA_002080435_01968 | GCA_002080435_03634 | Unannotated protein. | Unannotated protein. | 0.661 |
BV98_000822 | BV98_001158 | GCA_002080435_01968 | GCA_002080435_03407 | Unannotated protein. | Unannotated protein. | 0.667 |
BV98_000822 | BV98_002525 | GCA_002080435_01968 | GCA_002080435_00022 | Unannotated protein. | Unannotated protein. | 0.990 |
BV98_000822 | BV98_002527 | GCA_002080435_01968 | GCA_002080435_00024 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.923 |
BV98_000822 | BV98_002529 | GCA_002080435_01968 | GCA_002080435_00026 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.991 |
BV98_000822 | BV98_003889 | GCA_002080435_01968 | GCA_002080435_03812 | Unannotated protein. | Unannotated protein. | 0.882 |
BV98_000822 | acpP | GCA_002080435_01968 | GCA_002080435_00025 | Unannotated protein. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.967 |
BV98_000822 | fabH | GCA_002080435_01968 | GCA_002080435_02073 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.861 |
BV98_000822 | fabZ | GCA_002080435_01968 | GCA_002080435_00731 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.971 |
BV98_001158 | BV98_000822 | GCA_002080435_03407 | GCA_002080435_01968 | Unannotated protein. | Unannotated protein. | 0.667 |
BV98_001158 | BV98_002525 | GCA_002080435_03407 | GCA_002080435_00022 | Unannotated protein. | Unannotated protein. | 0.785 |
BV98_001158 | BV98_002527 | GCA_002080435_03407 | GCA_002080435_00024 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.607 |
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