STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BV98_002579Unannotated protein. (156 aa)    
Predicted Functional Partners:
BV98_000524
Unannotated protein.
  
    0.783
BV98_001120
Unannotated protein.
  
     0.699
BV98_001402
Unannotated protein.
   
    0.633
BV98_000951
Unannotated protein.
  
     0.605
BV98_001606
Unannotated protein.
  
     0.541
BV98_002578
Unannotated protein.
       0.540
GCA_002080435_03078
Unannotated protein.
  
     0.454
BV98_001978
Unannotated protein.
  
     0.446
BV98_001229
Unannotated protein.
  
     0.443
BV98_000798
Unannotated protein.
 
     0.442
Your Current Organism:
Sphingobium herbicidovorans
NCBI taxonomy Id: 76947
Other names: ATCC 700291, CIP 106705, DSM 11019, IFO 16415, LMG 18315, LMG:18315, MBIC 3166, NBRC 16415, S. herbicidovorans, Sphingomonas herbicidovorans, strain MH
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.