STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BV98_000044Unannotated protein. (145 aa)    
Predicted Functional Partners:
BV98_000047
Unannotated protein.
 
     0.875
BV98_000045
Unannotated protein.
 
     0.820
BV98_000046
Unannotated protein.
       0.760
BV98_000043
Unannotated protein.
 
     0.755
BV98_000048
Unannotated protein.
       0.686
gloB_2
Unannotated protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
  0.614
gloB_1
Unannotated protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
  0.614
trpA
Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.493
BV98_002004
Unannotated protein.
 
     0.438
Your Current Organism:
Sphingobium herbicidovorans
NCBI taxonomy Id: 76947
Other names: ATCC 700291, CIP 106705, DSM 11019, IFO 16415, LMG 18315, LMG:18315, MBIC 3166, NBRC 16415, S. herbicidovorans, Sphingomonas herbicidovorans, strain MH
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.