Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BV98_000415 | BV98_000417 | GCA_002080435_00603 | GCA_002080435_00601 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
BV98_000415 | BV98_000782 | GCA_002080435_00603 | GCA_002080435_02008 | Unannotated protein. | Unannotated protein. | 0.995 |
BV98_000415 | BV98_000786 | GCA_002080435_00603 | GCA_002080435_02004 | Unannotated protein. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.995 |
BV98_000415 | BV98_000787 | GCA_002080435_00603 | GCA_002080435_02003 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.995 |
BV98_000415 | BV98_001304 | GCA_002080435_00603 | GCA_002080435_04044 | Unannotated protein. | Unannotated protein. | 0.992 |
BV98_000415 | BV98_001644 | GCA_002080435_00603 | GCA_002080435_01344 | Unannotated protein. | Unannotated protein. | 0.991 |
BV98_000415 | BV98_001646 | GCA_002080435_00603 | GCA_002080435_01342 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.994 |
BV98_000415 | BV98_002232 | GCA_002080435_00603 | GCA_002080435_03928 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.994 |
BV98_000415 | ctaB | GCA_002080435_00603 | GCA_002080435_02005 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.980 |
BV98_000417 | BV98_000415 | GCA_002080435_00601 | GCA_002080435_00603 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein. | 0.999 |
BV98_000417 | BV98_000782 | GCA_002080435_00601 | GCA_002080435_02008 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein. | 0.985 |
BV98_000417 | BV98_000786 | GCA_002080435_00601 | GCA_002080435_02004 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.692 |
BV98_000417 | BV98_000787 | GCA_002080435_00601 | GCA_002080435_02003 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.995 |
BV98_000417 | BV98_001304 | GCA_002080435_00601 | GCA_002080435_04044 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein. | 0.992 |
BV98_000417 | BV98_001644 | GCA_002080435_00601 | GCA_002080435_01344 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein. | 0.987 |
BV98_000417 | BV98_001646 | GCA_002080435_00601 | GCA_002080435_01342 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.620 |
BV98_000417 | BV98_002232 | GCA_002080435_00601 | GCA_002080435_03928 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.632 |
BV98_000417 | BV98_002918 | GCA_002080435_00601 | GCA_002080435_02324 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.991 |
BV98_000417 | ctaB | GCA_002080435_00601 | GCA_002080435_02005 | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.974 |
BV98_000782 | BV98_000415 | GCA_002080435_02008 | GCA_002080435_00603 | Unannotated protein. | Unannotated protein. | 0.995 |
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